149. Santostasi, N.L., S. Bonizzoni, G. Bearzi, L. Eddy, O. Gimenez (2016). A Robust Design Capture-Recapture Analysis of Abundance, Survival and Temporary Emigration of Three Odontocete Species in the Gulf of Corinth, Greece. Plos One. In press.
148. Kazakou, E., G. Fried, J. Richarte, O. Gimenez, C. Violle and A. Metay (2016). A plant trait-based response-and-effect framework to assess vineyard inter-row soil management. Botany Letters. In press.
147. G. Péron, J.-M. Gaillard, C. Barbraud, C. Bonenfant, A. Charmantier, R. Choquet, T. Coulson, V. Grosbois, A. Loison, G. Marzolin, N. Owen-Smith, D. Pardo, F. Plard, R. Pradel, C. Toïgo, O. Gimenez (2016). Evidence of reduced individual heterogeneity in adult survival of long-lived species. Evolution. In press. doi:10.1111/evo.13098
146. Abadi, F., C. Barbraud, O. Gimenez (2016). Integrated population modeling reveals the impact of climate on survival of juvenile emperor penguin. Global Change Biology. In press.
145. McCrea, R.S., B.J.T. Morgan, O. Gimenez (2016). A new strategy for diagnostic model assessment in capture-recapture. Journal of the Royal Statistical Society: Series C. In press.
144. Tidière, M., J.-M. Gaillard, V. Berger, D.W.H. Müller, L. Bingaman Lackey, O. Gimenez, M. Clauss and J.-F. Lemaître (2016). Comparative analyses of longevity and senescence reveal variable survival benefits of living in zoos across mammals. Scientific Reports. 6:36361.
143. G. Bearzi, S. Bonizzoni, N.L. Santostasi, N.B. Furey, L. Eddy, V.D. Valavanis, O. Gimenez (2016). Dolphins in a Scaled-Down Mediterranean: The Gulf of Corinth’s Odontocetes. Advances in Marine Biology. In press.
142. Soldatini, C., Y.V. Albores-Barajas, B. Massa and O. Gimenez (2016). Forecasting ocean warming impacts on seabird demography: a case study on the European storm petrel. Marine Ecology Progress Series. 552: 255–269.
141. Gervasi, V., Brøseth, H, Gimenez, O., Nilsen, E.B., Odden, J., Flagstad, O. and J.D.C. Linnell (2016). Sharing data improves monitoring of trans-boundary populations: the case of wolverines in central Scandinavia. Wildlife Biology. 22: 95–106.
140. Piédallu, B., Quenette, P.-Y., Mounet, C., Lescureux, N., Borelli-Massines, M., Dubarry, E., Camarra, J.-J. & Gimenez, O. (2016). Spatial variation in public attitudes towards brown bears in the French Pyrénées. Biological Conservation. 197: 90–97.
139. Boulenger, C., A. Acou, O. Gimenez, F. Charrier, J. Tremblay & E. Feunteun (2016). Factors underlying survival of yellow European eels in two unexploited eel sub-populations. Freshwater Biology. In press.
138. Gager, Y., O. Gimenez, M. Teage O’Mara and Dina K.N. Dechmann (2016) Group size, survival and surprisingly short lifespan in socially foraging bats. BMC Ecology. 16:2
137. C.A. Bost, C. Cotté, P. Terray, C. Barbraud, C. Bon, K. Delord, O. Gimenez, Y. Handrich, Y. Naito, C. Guinet, H. Weimerskirch (2015). Large-scale climatic anomalies affect marine predator foraging behaviour and demography. Nature Communications. 6:8220
136. Tidière, M., J.-M. Gaillard, D.W.H. Müller, L. Bingaman Lackey, O. Gimenez, M. Clauss, J.-F. Lemaître (in press). Does sexual selection shape sex-differences in longevity and senescence patterns across vertebrates? A review and new insights from captive ruminants. Evolution. DOI: 10.1111/evo.12801
135. Mouquet, N., Lagadeuc, Y., Devictor, V., Doyen, L., Duputié, A., Eveillard, D., Faure, D., Garnier, E., Gimenez, O., Huneman, P., Jabot, F., Jarne, P., Joly, D., Julliard, R., Kéfi, S., Kergoat, G. J., Lavorel, S., Le Gall, L., Meslin, L., Morand, S., Morin, X., Morlon, H., Pinay, G., Pradel, R., Schurr, F. M., Thuiller, W., Loreau, M. (2015). Predictive ecology in a changing world. Journal of Applied Ecology.
134. Gamelon, M., Gaillard, J.-M., Gimenez, O., Coulson, T., Tuljapurkar, S., Baubet, E. (2016). Linking demographic responses and life history tactics from longitudinal data in mammals. Oikos. 125: 395–404.
133. Karamanlidis, A.A., M. de Gabriel Hernando, L. Krambokoukis, O. Gimenez (2015). Evidence of a large carnivore population recovery: counting bears in Greece. Journal for Nature Conservation. 27: 10–17
132. Bischof, R., H. Broseth, O. Gimenez (2015). Wildlife in a politically divided world: insularism inflates estimates of brown bear abundance. Conservation Letters.
131. Gimenez, O., Buckland, S.T., Morgan, B.J.T., Bez, N., Bertrand, S., Choquet, R., Dray, S., Etienne, M.-P., Fewster, R., Gosselin, F., Mérigot, B., Monestiez, P., Morales, J., Mortier, F., Munoz, F., Ovaskainen, O., Pavoine, S., Pradel, R., Schurr, F.M., Thomas, L., Thuiller, W., Trenkel, V., de Valpine P., E. Rexstad (2015). Statistical ecology comes of age. Biology Letters. 10: 20140698. Data and R codes.
130. Tidière, M., J.-M. Gaillard, D.W.H. Müller, L. Bingaman Lackey, O. Gimenez, M. Clauss, J.-F. Lemaître (2014). Males do not senesce faster in large herbivores with highly seasonal rut. Experimental Gerontology. 60:167–172
129. Koons, D.N., F. Colchero, K. Hersey, and O. Gimenez (2015). Disentangling the effects of climate, density dependence, and harvest on an iconic large herbivore’s population dynamics. Ecological Applications 25, 956–967
128. Gervasi, V., Brøseth, H., Gimenez, O., Nilsen, E., Linnell, J. (2014). The risks of learning: confounding detection and demographic trend when using count-based indices for population monitoring. Ecology and Evolution. 4: 4637–4648.
127. Gamelon, M., Gimenez, O., Baubet, E., Coulson, T., Tuljapurkar, S., Gaillard, J.-M. (2014). Influence of Life-History Tactics on Transient Dynamics: A Comparative Analysis across Mammalian Populations. The American Naturalist 184: 673-683
126. Barnagaud, J.Y., Papaïx, J., Gimenez, O., Svenning, J.-C. (2014). Dynamic spatial interactions between the native invader Brown-headed Cowbird and its hosts – a metacommunity approach. Diversity and Distributions. 21: 511-522
125. Orgeret, F, Garrigue, C., Gimenez, O., Pradel, R. (2014). Robust assessment of population trends in marine mammals applied to the New Caledonia Humpback Whales. Marine Ecology Progress Series 515: 265–273
124. Koons, D.N., M. Gamelon, J.-M. Gaillard, L.M. Aubry, R.F. Rockwell, F. Klein, R. Choquet and O. Gimenez (2014). Methods for Studying Cause-Specific Senescence in the Wild. Methods in Ecology and Evolution 5: 924-933
123. Gamelon, M., S. Focardi, J.-M. Gaillard, O. Gimenez, C. Bonenfant, B. Franzetti, R. Choquet, F. Ronchi, E. Baubet, J.-F. Lemaître. (2014). Do age-specific survival patterns of wild boar fit current evolutionary theories of senescence? Evolution. 68: 3636–3643
122. Blanc, L., E. Marboutin, S. Gatti, F. Zimmermann and O. Gimenez (2014). Improving abundance estimation by combining capture-recapture and occupancy data: example with a large carnivore. Journal of Applied Ecology. 51: 1733–1739
121. Gimenez, O., L. Blanc, A. Besnard, R. Pradel, P. F. Doherty Jr, E. Marboutin and R. Choquet (2014). Fitting occupancy models with E-SURGE: hidden-Markov modelling of presence-absence data. Methods in Ecology and Evolution. 5: 592–597. Wiki.
120. Lee, K.A., C. Huveneers, O. Gimenez, V. Peddemors, R.G. Harcourt (2014). To catch or to sight? A comparison of demographic parameter estimates obtained from mark-recapture and mark-resight models. Biodiversity and Conservation. 23: 2781-2800
119. Soldatini, C., Y. V. Albores-Barajas, B. Massa and O. Gimenez (2014). Climate Driven Life Histories: The Case of the Mediterranean Storm Petrel. Plos One 9: e94526
118. Santin-Janin, H., B. Hugueny, P. Aubry, D. Fouchet, O. Gimenez and D. Pontier (2014). Accounting for Sampling Error When Inferring Population Synchrony from Time-Series Data: A Bayesian State-Space Modelling Approach with Applications. Plos One 9: e87084
117. Hardouin, L. A., A. Robert, M. Nevoux, O. Gimenez, F. Lacroix and Y. Hingrat (2014). Meteorological conditions influence short-term survival and dispersal in a reinforced bird population. Journal of Applied Ecology. 51: 1494–1503
116. Desprez M., Harcourt R., Hindell M.A., Cubaynes S., Gimenez O., McMahon C.R. (2014). Age-specific cost of first reproduction in female southern elephant seals. Biology Letters 10: 20140264.
115. Cubaynes, S. C. Lavergne, O. Gimenez (2014). Fitting animal survival models with temporal random effects. Environmental and Ecological Statistics 21:599–610. Codes.
114. Lagrange, P., R. Pradel, M. Bélisle, O. Gimenez (2014). Estimating dispersal among numerous sites using capture-recapture data. Ecology. 95: 2316-2323
113. Souchay, G., O. Gimenez, G. Gauthier, R. Pradel (2014). Variations in Band Reporting Rate and Implications for Kill Rate in Greater Snow Geese. Avian Conservation and Ecology. 9: 1
112. Le Saout, S., S. Chollet, S. Chamaille-Jammes, L. Blanc, S. Padié, T. Verchère, J.A. Gaston, M. Gillingham, O. Gimenez, K.L. Parker, D. Picot, H. Verheyden, J.-L. Martin (2014). Understanding the Paradox of Deer Persisting at High Abundance in Heavily Browsed Habitats. Wildlife Biology. 20:122-135
111. Millon, A., S.J. Petty, B. Little, O. Gimenez, T. Cornulier, X. Lambin (2014). Deleterious effect of dampening prey cycle overrides the impact of climate change on predator dynamics: a long term demographic study on tawny owls. Global Change Biology. 20: 1770–1781
110. Cole, D., B.J.T. Morgan, R.S. McCrea, R. Pradel, O. Gimenez, R. Choquet (2014). Does Your Species Have Memory? Analysing Capture-Recapture Data with Memory Models. Ecology and Evolution. 4: 2124–2133


109. Abadi, F., C. Barbraud, D. Besson, J. Bried, P.-A. Crochet, K. Delord, J. Forcada, V. Grosbois, R. A. Phillipse, P. Sagar, P. Thompson, S. Waugh, H. Weimerskirch, A.G. Wood, O. Gimenez (2014). Importance of accounting for phylogenetic dependence in multi-species mark–recapture studies. Ecological Modelling. 273: 236-241.
108. Frederiksen, M., Lebreton, J.-D., Pradel, R., Choquet, R. and O. Gimenez (2014). Identifying links between vital rates and environment: a toolbox for the applied ecologist. Journal of Applied Ecology. 51: 71-81.


107. Marescot, L., Chapron, G., Chadès, I., Fackler, P., Duchamp, C., Marboutin, E. and O. Gimenez (2013). Complex decisions made simple: A primer on stochastic dynamic programming. Methods in Ecology and Evolution 4: 872-884. Codes.
106. Gamelon, M., M. Douhard, E. Baubet, O. Gimenez, S Brandt and J.-M. Gaillard (2013). Fluctuating food resources influence developmental plasticity in wild boar. Biology Letters 9: 20130419
105. Desprez, M., McMahon, C., Hindell, M., Harcourt, R. and O. Gimenez (2013). Known unknowns in an imperfect world: incorporating uncertainty in recruitment estimates using multi-event capture-recapture models. Ecology and Evolution 3: 4658-4668
104. Desprez, M., Crivelli, A.J., Lebel I., Massez G. and O. Gimenez (2013). Demographic assessment of a stocking experiment in European Eels. Ecology of Freshwater Fish 22: 412-420
103. Lamy, T., O. Gimenez, J.-P. Pointier, P. Jarne and P. David (2013). Metapopulation dynamics of species with cryptic life stages. The American Naturalist 181:479-491. Codes.
102. Madon, B., C. Garrigue, R. Pradel, O. Gimenez (2013). Transience in the humpback whale population of New Caledonia and implications for abundance estimation. Marine Mammal Science 29: 669-678. Codes.
101. Gamelon, M., J.-M. Gaillard, E. Baubet, S. Devillard, L. Say, S. Brandt & O. Gimenez (2013). The relationship between phenotypic variation among offspring and mother body mass in wild boar: Evidence of coin-flipping? Journal of Animal Ecology 82: 937-945.
100. Choquet, R., A. Sanz-Aguilar, B. Doligez, E. Nogué, R. Pradel, L. Gustafsson and O. Gimenez (2013). Estimating demographic parameters from capture-recapture data with dependence among individuals within clusters. Methods in Ecology and Evolution 4: 474-482. Software.
99. Péron, G., Y. Ferrand, G. Leray and O. Gimenez (2013). Waterbird demography as indicator of wetland health: The French-wintering common snipe population. Biological Conservation. 164: 123-128
98. Bolker, B., Gardner, B., Maunder, M., Berg, C., Brooks, M., Comita, L., Crone, E., Cubaynes, S., Davies, T., de Valpine, P., Ford, J., Gimenez, O., Kéry, M., Kim, E., Lennert-Cody, C., Magnusson, A., Martell, S., Nash, J., Nielsen, A., Regetz, J., Skaug, H., Zipkin, E. (2013). Strategies for fitting nonlinear ecological models in R, AD Model Builder, and BUGS. Methods in Ecology and Evolution 4: 501-512. Website.
97. Praud, A., O. Gimenez, G. Zanella, N. Pozzi, V. Antras, L. Meyer, B. Garin-Bastuji (2013). Evaluation of five serological tests for the diagnosis of porcine brucellosis in French Polynesia. Trop Anim Health Prod 45: 933-936
96. Bellan, S., O. Gimenez, R. Choquet and W. Getz (2012). A Hierarchical Distance Sampling Approach to Estimating Mortality Rates from Opportunistic Carcass Surveillance Data. Methods in Ecology and Evolution 4: 361-369
95. de Villemereuil, P., Gimenez, O., Doligez, B. (2012). Comparing parent-offspring regression with Frequentist and Bayesian animal models to estimate heritability in wild populations: a simulation study for Gaussian and binary traits. Methods in Ecology and Evolution 4: 260-275. Codes.
94. Cam, E., O. Gimenez, R. Alpizar-Jara, L. M. Aubry, M. Authier, E. G. Cooch, D. N. Koons, W. A. Link, J.-Y. Monnat, J. D. Nichols, J. J. Rotella, J. A. Royle, R. Pradel (2013). Looking for a needle in a haystack: inference about individual fitness components in a heterogeneous population. Oikos 122: 739-753.
93. Lebreton, J.-D. and O. Gimenez (2013). Detecting and estimating density-dependence in wildlife populations. Journal of Widlife Management 77: 12-23.
92. Gimenez, O., Abadi, F., Barnagaud, J.-Y., Blanc, L., Buoro, M., Cubaynes, S., Desprez, M., Gamelon, M., Guilhaumon, F., Lagrange, P., Madon, B., Marescot, L., Papadatou, E., Papaïx, J., Péron, G., Servanty, S. (2013). How can quantitative ecology be attractive to young scientists? Balancing computer/desk work with field work. Animal Conservation 16:134-136.
91. Bergeron, P., Montiglio, P.-O., Reale, D., Humphries, M., Gimenez, O. and D. Garant (2013). Disruptive viability selection on adult exploratory behavior in eastern chipmunks. Journal of Evolutionary Biology 26: 766-774.
90. Blanc, L., E. Marboutin, S. Gatti, O. Gimenez (2013). Abundance of rare and elusive species: empirical investigation of closed vs. spatially explicit capture-recapture models with Lynx as a case study. Journal of Wildlife Management 77:372-378.


89. Pettex, E., S.-H. Lorentsen, D. Grémillet, O. Gimenez, R.T. Barrett, J.-B. Pons, C. Le Bohec and F. Bonadonna (2012). Multi-scale foraging variability in northern gannet (Morus bassanus) fuels potential foraging plasticity. Marine Biology 159: 2743-2756
88. Bauduin, S., J. Martin, H.H. Edwards, O. Gimenez, S. Koslovsky and D. Fagan (2012). An index of risk of co-occurrence between marine mammals and watercrafts: example of the Florida manatee. Biological Conservation 159: 127-136
87. Charpentier, M.J.E., Huchard, E., Widdig, A., Gimenez, O., Sallé, B., Kappelee, P. and J.P. Renoult (2012). Distribution of affiliative behavior accross kin classes and their fitness consequences in mandrills. Ethology 118: 1198-1207
86. Gimenez, O., Lebreton, J.-D., Gaillard, J.-M., Choquet, R. and R. Pradel (2012). Estimating demographic parameters using hidden process dynamic models. Theoretical Population Biology 82: 307-316. Codes.
85. Buoro, M., E. Prévost, O. Gimenez (2012). Digging through model complexity: using hierarchical models to uncover evolutionary processes in the wild. Journal of Evolutionary Biology 25: 2077-2090
84. Hardouin, L. A., M. Nevoux, A. Robert, O. Gimenez and Y. Hingrat (2012). Determinisms and costs of natal dispersal in a lekking species. Oïkos 121: 804-812
83. Gamelon, M., Gaillard, J.-M., S. Servanty, O. Gimenez, C. Toïgo, E. Baubet, F. Klein, J.-D. Lebreton (2012). Making use of harvest information to examine alternative management scenarios: a body weight-structured model for wild boar. Journal of Applied Ecology 49: 833-841.
82. Libois, E., O. Gimenez, D. Oro, E. Mínguez, R. Pradel, A. Sanz-Aguilar (2012). Nest boxes: A successful management tool for the conservation of an endangered seabird. Biological Conservation 155: 39-43.
81. Abadi, F., O. Gimenez, H. Jakobere, W. Stauberf, R. Arlettaz and M. Schaub (2012). Estimating the strength of density dependence in the presence of observation errors using integrated population models. Ecological Modelling 242: 1-9.
80. Lebreton, J.-D., R. Choquet and O. Gimenez (2012). Simple estimation and test procedures in capture-mark-recapture mixed models. Biometrics 68:494-503. Software.
79. Cubaynes, S., C. Lavergne, E. Marboutin, and O. Gimenez (2012). Assessing individual heterogeneity using model selection criteria: How many mixture components in capture-recapture models? Methods in Ecology and Evolution 3: 564-573. Codes.
78. Frank, B., O. Gimenez and P. Baret (2012). Assessing brown trout spawning movements with multistate capture-recapture models: a case study in a fully-controlled Belgian brook. Canadian Journal of Fisheries and Aquatic Sciences 69: 1091-1104
77. Péron, G., Y. Ferrand, F. Gossmann, C. Bastat, M. Guenezan and O. Gimenez (2012). Spatial heterogeneity in mortality and its impact on the population dynamics of Eurasian woodcocks. Population Ecology 54: 305-312
76. Cubaynes, S, C. Doutrelant, A. Gregoire, P. Perret, B. Faivre, and O. Gimenez (2012). Testing hypotheses in evolutionary ecology with imperfect detection: Structural equation modeling of mark-recapture data. Ecology 93: 248-255. Codes.
75. Gimenez, O., T. Anker-Nilssen and V. Grosbois (2012). Exploring causal pathways in demographic parameter variation: Path analysis of mark-recapture data. Methods in Ecology and Evolution 3: 427-432. Codes.
74. Choquet, R. and O. Gimenez (2012). Towards built-in capture-recapture mixed models in program E-SURGE. Journal of Ornithology 152: 625-639. Software.
73. Marescot, L., O. Gimenez, C. Duchamp, E. Marboutin and G. Chapron (2012). Reducing matrix population models with application to social animal species. Ecological Modelling 232: 91-96
72. Papadatou, E., R. Pradel, M. Schaub, D. Dolch, H. Geiger, C. Ibañez, G. Kerth, A. Popa-Lisseanu, W. Schorcht, J. Teubner and O. Gimenez (2012). Comparing survival among species with imperfect detection using multilevel analysis of mark-recapture data: a case study on bats. Ecography 35: 153-161. Codes.
71. Praud, A., O. Gimenez, G. Zanella, B. Dufour, N. Pozzi, V. Antras, L. Meyer, B. Garin-Bastuji (2012). Estimation of sensitivity and specificity of five serological tests for the diagnosis of porcine brucellosis. Preventive Veterinary Medicine 104: 94-100
70. Archaux, F., P.-Y. Henry and O. Gimenez (2012). When can we ignore the problem of imperfect detection in comparative studies? Methods in Ecology and Evolution 3: 188-194. Codes.
69. Caniglia, R., E. Fabbri, S. Cubaynes, O. Gimenez, J.-D. Lebreton and E. Randi (2012). An improved procedure to estimate wolf abundance using non-invasive genetic sampling and capture-recapture mixture models. Conservation Genetics 13: 53-64
68. Fletcher, D., Lebreton, J.-D., Marescot, L., Schaub, M., Gimenez, O., Slooten, E. and S. Dawson (2012). Bias in estimation of adult survival and asymptotic population growth rate caused by undetected capture heterogeneity. Methods in Ecology and Evolution 3: 206-216


67. Buoro, M., O. Gimenez and E. Prévost (2011). Assessing adaptive phenotypic plasticity by means of conditional strategies from empirical data: The latent environmental threshold model. Evolution 66:996-1009. Codes.
66. Gamelon, M., A. Besnard, J.-M. Gaillard, S. Servanty, E. Baubet, S. Brandt and O. Gimenez (2011). High hunting pressure selects for earlier birth data: Wild boar as a case study. Evolution 65:3100-3112
65. Marescot, L., Pradel, R., Duchamp, C. Cubaynes, S., Marboutin, E., Choquet, R. Miquel, C. and O. Gimenez (2011). Capture-recapture population growth rate as a robust tool against detection heterogeneity for population management. Ecological Applications 21:2898-2907
64. Péron, G., Y. Ferrand, F. Gossmann, C. Bastat, M. Guenezan and O. Gimenez (2011). Escape migration decisions in Eurasian Woodcocks: insights from survival analyses using large-scale recovery data. Behavioral Ecology and Sociobiology 65:1949-1955
63. Charmantier*, A., M. Buoro*, O. Gimenez and H. Weimerskirch (2011). Heritability of short-scale natal dispersal in a large-scale foraging bird, the wandering albatross. Journal of Evolutionary Biology 24:1487-1496. *These authors contributed equally to the work. Codes.
62. Desprez, M. R. Pradel, E. Cam, J.-Y. Monnat and O. Gimenez (2011). Now you see him, now you don’t: Experience, not age, is related to reproduction in Kittiwakes. Proceedings of the Royal Society B: Biological Sciences 278: 3060-3066.
61. Madon, B., O. Gimenez, B. McArdle, C. Baker and C. Garrigue (2011). A New Method For Estimating Animal Abundance with Two Sources of Data in Capture-Recapture Studies. Methods in Ecology and Evolution 2:390-400
60. Nevoux, M., O. Gimenez, M. Nicoll, D. Arlt, C. Jones and K. Norris (2011). Population regulation of territorial species: both site-dependence and interference mechanisms matter. Proceedings of the Royal Society B: Biological Sciences 278:2173-2181
59. Péron, G., Y. Ferrand, F. Gossmann, C. Bastat, M. Guenezan and O. Gimenez (2011). Nonparametric spatial regression of survival probability: visualization of population sinks in Eurasian Woodcock. Ecology 92:1672-1679
58. Servanty, S., J.-M. Gaillard, Ronchi, F., Focardi, S., Baubet E. & O. Gimenez (2011). Influence of harvesting pressure on demographic tactics: implications for wildlife management. Journal of Applied Ecology 48: 835–843
57. Fontaine, R., O. Gimenez and J. Bried (2011). The impact of introduced predators, light-induced mortality of fledglings and poaching on the dynamics of the Cory’s shearwater (Calonectris diomedea) population from the Azores, northeastern subtropical Atlantic. Biological Conservation 144: 1998–2011
56. Marzolin, G., A. Charmantier and O. Gimenez (2011). Frailty in state-space models: application to actuarial senescence in the dipper. Ecology 92:562-567. Codes.
55. Cubaynes, S., P. F. Doherty Jr, E. A. Schreiber, R. W. Schreiber and O. Gimenez (2011). To breed or not to breed: seabirds response to extreme climatic events. Biology Letters 7: 303-306.
54. Papadatou, E. Ibáñez, C., Pradel, R. Juste, J. and O. Gimenez (2011). Assessing survival in a multi-population system: a case study on bat populations. Oecologia 165:925-933. Codes.
53. Barnagaud, J.-Y., Crochet, P.-A., Magnani, Y., Bernard-Laurent, A., Menoni, E., Novoa, C. and O. Gimenez (2011). Short-term response to the North Atlantic Oscillation but no long-term effects of climate change on the reproductive success of an alpine bird. Journal of Ornithology 152: 631-641.


52. McCrea, R. S., B.J.T. Morgan, O. Gimenez, P. Besbeas, J.-D. Lebreton and T. Bregnballe (2010). Multi-site Integrated Population Modelling. Journal of Agricultural, Biological, and Environmental Statistics 15: 539-561.
51. Papaïx, J., S. Cubaynes, M. Buoro, A. Charmantier, P. Perret and O. Gimenez (2010). Combining capture–recapture data and pedigree information to assess heritability of demographic parameters in the wild. Journal of Evolutionary Biology 23: 2176-2184. Codes.
50. Servanty, S., R. Choquet, E. Baubet, S. Brandt, J.-M. Gaillard, M. Schaub, C. Toïgo, J.-D. Lebreton, M. Buoro and O. Gimenez (2010). Assessing whether mortality is additive using marked animals: a Bayesian state-space modeling approach. Ecology 91: 1916–1923. Codes.
49. Besnard, A., Novoa, C. and O. Gimenez (2010). Hunting impact on Pyrenean gray partridge population dynamics. Wildlife Biology 16: 135-143.
48. Buoro, M., Prévost, E. and O. Gimenez (2010). Investigating evolutionary trade-offs in wild populations of Atlantic salmon (Salmo salar): incorporating detection probabilities and individual heterogeneity. Evolution 64: 2629-2642.
47. Schaub, M. Aebischer, A. Gimenez, O., Berger, S. and R. Arlettaz (2010). Massive immigration balances high anthropogenic induced mortality in a stable eagle owl population: lessons for conservation. Biological Conservation 143: 1911–1918.
46. Guilhaumon, F., Mouillot, D. and O. Gimenez (2010). mmSAR : an R-package for multimodel species-area relationship inference. Ecography 33:420-424. Software.
45. Péron, G. Gimenez, O., Charmantier, A., Gaillard, J.-M. and P.-A. Crochet (2010). Age at the onset of senescence in birds and mammals is predicted by early-life performance. Proceedings of the Royal Society B: Biological Sciences 277: 2849–2856.
44. Gimenez, O. and R. Choquet (2010). Incorporating individual heterogeneity in studies on marked animals using numerical integration: capture-recapture mixed models. Ecology 91: 951-957. Software.
43. Péron, G., Crochet, P.A.C., Choquet, R., Pradel, R., Lebreton, J.-D. and O. Gimenez. (2010). Capture-recapture models with heterogeneity to study survival senescence in the wild. Oïkos 119: 524-532. Appendix.
42. Cubaynes, S. Pradel, R. Choquet, R. Duchamp, C. Gaillard, J.-M., Lebreton, J.-D., Marboutin, E., Miquel, C., Reboulet, A.-M., Poillot, C., Taberlet, P. and O. Gimenez. (2010). Importance of accounting for detection heterogeneity when estimating abundance: the case of French wolves. Conservation Biology 24:621-626.
41. Abadi, F., Gimenez, O., Arlettaz, R. and M. Schaub (2010). An assessment of integrated population models: bias, accuracy, and violation of the assumption of independence. Ecology 91:7-14.
40. Abadi, F., Gimenez, O., Ullrich, B., Arlettaz, R. and M. Schaub (2010). Estimation of immigration rate using integrated population models. Journal of Applied Ecology 47: 393–400.
39. Mihoub, J.-B., Gimenez, O., Pilard, P. and F. Sarrazin (2010). Challenging conservation of migratory species: Sahelian rainfalls drive first-year survival of the vulnerable Lesser Kestrel Falco naumanni. Biological Conservation 143: 839-847.


38. Gimenez, O., Grégoire, A. and T. Lenormand (2009). Estimating and visualizing fitness surfaces using mark-recapture data. Evolution. 63:3097–3105. Codes.
37. Choquet, R., Lebreton, J.-D., Gimenez, O., Reboulet, A.-M., and R. Pradel. (2009). U-CARE: Utilities for performing goodness of fit tests and manipulating CApture-REcapture data. Ecography. 32: 1071-1074. Software.
36. Kazakou, E., Violle, C, Roumet, C., Pintor, C., Gimenez, O. and E. Garnier. (2009). Litter quality and decomposability of species from a Mediterranean succession depend on leaf traits but not on nitrogen supply. Annals of Botany 104:1151-1161
35. Grosbois, V., Harris, M. P., Anker-Nilssen, T., McCleery, R. H., Shaw, D. N., Morgan, B.J.T. and O. Gimenez (2009). Modeling survival at multi-population scales using mark–recapture data. Ecology 90:2922–2932. Codes.
34. Guilhaumon, F., O. Gimenez, K. J. Gaston, and D. Mouillot (2008). Reply to Bode and Murdoch: A proper integration of species-area relationship uncertainties into return on investment analyses is needed. Proceedings of the National Academy of Sciences. 106: E13
33. Bischof, R., J. E. Swenson, N. G. Yoccoz, A. Mysterud, and O. Gimenez (2009). The magnitude and selectivity of natural and multiple anthopogenic mortality causes in hunted brown bears. Journal of Animal Ecology 78:656–665.
32. Mennerat, A., P. Perret, P. Bourgault, J. Blondel, O. Gimenez, D. W. Thomas, P. Heeb, M. M. Lambrechts (2009). Aromatic plants in nests of blue tits: positive effects on nestlings. Animal Behaviour 77: 569–574.
31. Gimenez, O., S. Bonner, R. King, R. A. Parker, S.P. Brooks, L. E. Jamieson, V. Grosbois, B. J. T. Morgan, and L. Thomas (2009). WinBUGS for Population Ecologists: Bayesian Modeling Using Markov Chain Monte Carlo Methods. In Modeling Demographic Processes in Marked Populations. Thomson, D. L.; Cooch, E. G.; Conroy, M. J. (Eds.). Springer Series: Environmental and Ecological Statistics, Vol. 3, pages 883-915. Codes.
30. Gimenez, O., Morgan, B.J.T. and S.P. Brooks (2009). Weak Identifiability in Models for Mark-Recapture-Recovery Data. In Modeling Demographic Processes in Marked Populations. Thomson, D. L.; Cooch, E. G.; Conroy, M. J. (Eds.). Springer Series: Environmental and Ecological Statistics, Vol. 3, pages 1055-1067. Codes.
29. Gimenez, O. and C. Barbraud (2009). The Efficient Semiparametric Regression Modeling of Capture-Recapture Data: Assessing the Impact of Climate on Survival of Two Antarctic Seabird Species. In Modeling Demographic Processes in Marked Populations. Thomson, D. L.; Cooch, E. G.; Conroy, M. J. (Eds.). Springer Series: Environmental and Ecological Statistics, Vol. 3, pages 43-58.
28. Borysiewicz, R.S., B.J.T. Morgan, V. Hénaux, T. Bregnballe, J-D. Lebreton, and O. Gimenez (2009). An Integrated Analysis of Multisite Recruitment, Mark-Recapture- Recovery and Multisite Census Data. In Modeling Demographic Processes in Marked Populations. Thomson, D. L.; Cooch, E. G.; Conroy, M. J. (Eds.). Springer Series: Environmental and Ecological Statistics, Vol. 3, pages 579-591.


27. Guilhaumon, F. O. Gimenez, K. J. Gaston, and D. Mouillot (2008). Taxonomic & regional uncertainty in species-area relationships and the identification of richness hotspots. Proceedings of the National Academy of Sciences. 105:15458–15463.
26. Gimenez, O., A. Viallefont, A. Charmantier, R. Pradel, E. Cam, C. R. Brown, M. D. Anderson, M. Bomberger Brown, R. Covas, J.-M. Gaillard (2008). The risk of flawed inference in evolutionary studies when detectability is less than one. The American Naturalist. 172:441–448.
25. Gimenez,O. (2008). Discussion: Towards a Bayesian analysis template? The Canadian Journal of Statistics. 36: 21-24.
24. Grosbois V., Gimenez O., Gaillard, J.-M., Pradel, R., Barbraud, C., Clobert, J., Møller, A. P. and H. Weimerskirch (2008). Assessing the impact of climate variation on survival in vertebrate populations. Biological Reviews 83:357-399.
23. Pradel, R., L. Maurin-Bernier, O. Gimenez, M. Genovart, R. Choquet, and D. Oro (2008). Estimation of sex-specific survival with uncertainty in sex assessment. The Canadian Journal of Statistics 36: 29-42.
22. Charpentier, M.J.E., F. Prugnolle, O. Gimenez and A. Widdig (2008). Genetic heterozygosity and sociality in a primate species. Behavior Genetics 38: 151-158.
21. Ghimire, S., Gimenez, O., Pradel, R., McKey, D., and Y. Aumeeruddy-Thomas (2008). Demographic variation and population viability in a threatened Himalayan medicinal and aromatic herb (Nardostachys grandiflora): matrix modelling of harvesting effects in two contrasting habitats. Journal of Applied Ecology 45: 41-51.


20. Véran, S., Gimenez, O., Flint, E., Kendall, B., Doherty, P., and J.-D. Lebreton (2007). Quantifying the impact of longline fisheries on adult survival in the Black-footed Albatross. Journal of Applied Ecology 44: 942–952.
19. Gimenez, O., V. Rossi, R. Choquet, C. Dehais, B. Doris, H. Varella, J.-P. Vila and R. Pradel (2007). State-space modelling of data on marked individuals. Ecological Modelling 206: 431-438. Codes.
18. Schaub, M., Gimenez, O., Sierro, A. and R. Arlettaz (2007). Use of Integrated Modeling to Enhance Estimates of Population Dynamics Obtained from Limited Data. Conservation Biology 21: 945–955. Codes.
17. Kazakou, E., E. Garnier and Gimenez, O. (2007). Contribution of leaf lifespan and nutrient resorption to mean residence time: an elasticity analysis. Ecology 88: 1857-1863.
16. Pinay, G., B. Gumiero, E. Tabacchi, O. Gimenez, A.M. Tabacchi-Planty, M.M. Hefting, T.P. Burt, V.A. Black, C. Nilsson, V. Iordache, F. Bureau, L. Vought, G.E. Petts and H. Décamps. (2007). Patterns of denitrification rates in European alluvial soils under various hydrological regimes. Freshwater Biology 52: 252–266.


15. Gimenez O., C. Crainiceanu, C. Barbraud, S. Jenouvrier and B.J.T. Morgan. (2006). Semiparametric regression in capture-recapture modelling. Biometrics 62: 691-698. Codes.
14. Gimenez, O., R. Covas, C. R. Brown, M. D. Anderson, M. Bomberger Brown and T. Lenormand. (2006). Nonparametric estimation of natural selection on a quantitative trait using mark-recapture data. Evolution 60: 460-466. Codes.


13. Charpentier M., Peignot P., Hossaert-McKey M., Gimenez O., Setchell J. and E.J. Wickings (2005). Constraints on control: factors influencing reproductive success in male mandrils (Mandrillus sphinx). Behavioral Ecology 16: 614-623.
12. Do F.C., Goudiaby V.A., Gimenez O., Diagne A.L., Diouf M., Rocheteau A., Akpo L.E. (2005) Environmental influence on canopy phenology in the dry tropics Forest Ecology and Management. 215: 319-328.
11. Gimenez O., Choquet R., Lamor L., Scofield P., Fletcher D., J.-D. Lebreton and R. Pradel (2005). Efficient Profile-Likelihood Confidence Intervals for Capture-Recapture Models. Journal of Agricultural, Biological, and Environmental Statistics 10: 184-196.
10. Pradel, R., Gimenez O. and J.-D. Lebreton (2005). Principles and interest of GOF tests for multistate capture-recapture models. Animal Biodiversity and Conservation 28: 189–204. Software.
9. Ancrenaz M., Gimenez O., Ambu L., Ancrenaz K., Andau P., Goossens B., Payne J., Tuuga A. and I. Lackman- Ancrenaz (2005). Aerial Survey Gives New Estimates for Orang-utans in Sabah, Malaysia. Plos Biology 3: 30-37.


8. Gimenez O., Viallefont A., Choquet R., Catchpole E.A. and B.J.T. Morgan (2004). Methods for investigating parameter redundancy. Animal Biodiversity and Conservation 27: 561-572.
7. Choquet R., Reboulet A.-M., Pradel R., Gimenez O. and J.-D. Lebreton (2004). M-SURGE : new software specically designed for multistate capture-recapture models. Animal Biodiversity and Conservation 27: 207-215.
6. Schaub M., Gimenez O., Schmidt B.R. and R. Pradel (2004). Estimating survival and temporary emigration in the multistate capture-recapture framework. Ecology 85: 2107-2113. Codes.
5. Ancrenaz M., Goossens B., Gimenez O., Sawang A. and I. Lackman-Ancrenaz (2004). Determination of ape distribution and population size using ground and aerial surveys : a case study with orang-utans in lower Kinabatangan, Sabah, Malaysia. Animal Conservation 7: 375-385.
4. Charpentier M., Hossaert-McKey M., Peignot P., Gimenez O., Setchell J.M. and E.J. Wickings (2004). Social factors and male reproductive success in a highly sexually dimorphic primate: Paternity analysis over a 20 year period in a group of mandrills (Mandrillus sphinx). Folia Primatologica 75:244-245.


3. Gimenez O., Choquet R. and J.-D. Lebreton (2003). Parameter redundancy in multistate capture-recapture models. Biometrical Journal 45: 704-722. Codes.
2. Pradel R., Wintrebert C.M.A. and Gimenez O. (2003). A proposal for a goodness-of-fit test to the Arnason-Schwarz multisite capture-recapture model. Biometrics 59: 43-53. Software.
1. Besnard A., Gimenez O. and J.-D. Lebreton (2002). A model for the evolution of creching behaviour in gulls. Evolutionary Ecology 16: 489-503.